The cluster-computing tag has no wiki summary.
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Chinese Restaurant Process… Why?
I recently started to study non-parametric clustering methods and I come across to CRP. After reading all the material I found on the web there is one thing which is not completely clear to me: which ...
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Get job script directory with SGE
With the Sun Grid Engine, how can I get the directory where the job script is located, within the job script?
I need this so I can start the script with
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Multi-node jobs with Sun Grid Engine without MPI
I am trying to figure out how to write a proper job file for the Sun Grid Engine so I can run a parallel computation using Mathematica on multiple nodes. Unfortunately almost all tutorials on the ...
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Determining Computing Requirements
I am looking at building/buying myself a workstation for scientific computing. I will be doing molecular dynamics simulations that are memory intensive (data on a large number of particles and a ...
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Best hardware solution for microsecond Molecular Dynamics
We would like to reach Molecular Dynamics simulation of proteins with around 20000 atoms in explicit water with trajectories of around 1 microsecond each. We are looking at different options for ...
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What is the best high performance computing platform for engineering simulations?
What is the best platform for high performance computing (HPC)?
Windows is long gone, I think. So only Unix and Linux stand the chance. What platform will strongly back my interest on computational ...
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When is building a cluster in the cloud cheaper than building one in my lab for MD simulations?
An Amazon EC2 compute cluster costs about \$800-\$1000 (depending on duty cycle) per physical CPU core over the course of 3 years. In our last round of hardware acquisition, my lab picked up 48 cores ...
