assume $(r,s)$ and $(x,y)$ are the coordinates in the reference and actual element, respectively. the shape functions for mapping and interpolation are defined as
$$
\mathbf{M}=
\begin{bmatrix}
M_1(r,s) & M_2(r,s) & \cdots & M_m(r,s)
\end{bmatrix}^T
$$$$
\mathbf{I}=
\begin{bmatrix}
I_1(r,s) & I_2(r,s) & \cdots & I_i(r,s)
\end{bmatrix}^T
$$
matrix of first derivatives is
$$
\begin{bmatrix}\dfrac{\partial}{\partial r}\\
\dfrac{\partial}{\partial s}\end{bmatrix}=
\begin{bmatrix}
\dfrac{\partial x}{\partial r}&\dfrac{\partial y}{\partial r}\\
\dfrac{\partial x}{\partial s}&\dfrac{\partial y}{\partial s}
\end{bmatrix}
\begin{bmatrix}\dfrac{\partial}{\partial x}\\
\dfrac{\partial}{\partial y}\end{bmatrix}
$$
from which the matrix of second derivatives can be obtained
$$
\begin{bmatrix}\dfrac{\partial^2}{\partial r^2}\\
\dfrac{\partial^2}{\partial s^2}\\
\dfrac{\partial^2}{\partial r\partial s}\end{bmatrix}
=
\begin{bmatrix}\dfrac{\partial^2 x}{\partial r^2}&\dfrac{\partial^2 y}{\partial r^2}\\
\dfrac{\partial^2 x}{\partial s^2}&\dfrac{\partial^2 y}{\partial s^2}\\
\dfrac{\partial^2 x}{\partial r\partial s}&\dfrac{\partial^2 y}{\partial r\partial s}\end{bmatrix}
\begin{bmatrix}\dfrac{\partial}{\partial x}\\
\dfrac{\partial}{\partial y}\end{bmatrix}
+
\begin{bmatrix}\left(\dfrac{\partial x}{\partial r}\right)^2&
\left(\dfrac{\partial y}{\partial r}\right)^2&
2\dfrac{\partial x}{\partial r}\dfrac{\partial y}{\partial r}\\
\left(\dfrac{\partial x}{\partial s}\right)^2&
\left(\dfrac{\partial y}{\partial s}\right)^2&
2\dfrac{\partial x}{\partial s}\dfrac{\partial y}{\partial s}\\
\dfrac{\partial x}{\partial r}\dfrac{\partial x}{\partial s}&
\dfrac{\partial y}{\partial r}\dfrac{\partial y}{\partial s}&
\dfrac{\partial x}{\partial s}\dfrac{\partial y}{\partial r}+
\dfrac{\partial x}{\partial r}\dfrac{\partial y}{\partial s}\end{bmatrix}
\begin{bmatrix}\dfrac{\partial^2}{\partial x^2}\\
\dfrac{\partial^2}{\partial y^2}\\
\dfrac{\partial^2}{\partial x\partial y}\end{bmatrix}
$$
by mapping $x$ and $y$ with mapping shape functions we have
$$
x=\mathbf{M}^T\mathbf{X}^e\quad\Rightarrow\quad
\frac{\partial x}{\partial u}=\frac{\partial \mathbf{M}^T}{\partial u}\mathbf{X}^e,\quad
\frac{\partial^2 x}{\partial u^2}=\frac{\partial^2\mathbf{M}^T}{\partial u^2}\mathbf{X}^e,\quad
\frac{\partial^2 x}{\partial u\partial v}=\frac{\partial^2\mathbf{M}^T}{\partial u\partial v}\mathbf{X}^e,\quad
u,v=r,s
$$$$
y=\mathbf{M}^T\mathbf{Y}^e\quad\Rightarrow\quad
\frac{\partial y}{\partial u}=\frac{\partial \mathbf{M}^T}{\partial u}\mathbf{Y}^e,\quad
\frac{\partial^2 y}{\partial u^2}=\frac{\partial^2\mathbf{M}^T}{\partial u^2}\mathbf{Y}^e,\quad
\frac{\partial^2 y}{\partial u\partial v}=\frac{\partial^2\mathbf{M}^T}{\partial u\partial v}\mathbf{Y}^e,\quad
u,v=r,s
$$
where $\mathbf{X}^e$ and $\mathbf{Y}^e$ are column matrices of actual coordinates of the element $e$.
using mapped $x$ and $y$ and their derivatives in the matrix of first and second derivatives yields
$$
\begin{bmatrix}\dfrac{\partial^2\mathbf{I}^T}{\partial x^2}\\
\dfrac{\partial^2\mathbf{I}^T}{\partial y^2}\\
\dfrac{\partial^2\mathbf{I}^T}{\partial x\partial y}\end{bmatrix}
=
\begin{bmatrix}\left(\dfrac{\partial\mathbf{M}^T}{\partial r}\mathbf{X}^e\right)^2&
\left(\dfrac{\partial\mathbf{M}^T}{\partial r}\mathbf{Y}^e\right)^2&
2\left(\dfrac{\partial\mathbf{M}^T}{\partial r}\mathbf{X}^e\right)\left(\dfrac{\partial\mathbf{M}^T}{\partial r}\mathbf{Y}^e\right)\\
\left(\dfrac{\partial\mathbf{M}^T}{\partial s}\mathbf{X}^e\right)^2&
\left(\dfrac{\partial\mathbf{M}^T}{\partial s}\mathbf{Y}^e\right)^2&
2\left(\dfrac{\partial\mathbf{M}^T}{\partial s}\mathbf{X}^e\right)\left(\dfrac{\partial\mathbf{M}^T}{\partial s}\mathbf{Y}^e\right)\\
\left(\dfrac{\partial\mathbf{M}^T}{\partial r}\mathbf{X}^e\right)\left(\dfrac{\partial\mathbf{M}^T}{\partial s}\mathbf{X}^e\right)&
\left(\dfrac{\partial\mathbf{M}^T}{\partial r}\mathbf{Y}^e\right)\left(\dfrac{\partial\mathbf{M}^T}{\partial s}\mathbf{Y}^e\right)&
\left(\dfrac{\partial\mathbf{M}^T}{\partial s}\mathbf{X}^e\right)\left(\dfrac{\partial\mathbf{M}^T}{\partial r}\mathbf{Y}^e\right)+
\left(\dfrac{\partial\mathbf{M}^T}{\partial r}\mathbf{X}^e\right)\left(\dfrac{\partial\mathbf{M}^T}{\partial s}\mathbf{Y}^e\right)
\end{bmatrix}^{-1}
\left(
\begin{bmatrix}\dfrac{\partial^2\mathbf{I}^T}{\partial r^2}\\
\dfrac{\partial^2\mathbf{I}^T}{\partial s^2}\\
\dfrac{\partial^2\mathbf{I}^T}{\partial r\partial s}\end{bmatrix}
-
\begin{bmatrix}\dfrac{\partial^2 \mathbf{M}^T}{\partial r^2}\mathbf{X}^e&\dfrac{\partial^2 \mathbf{M}^T}{\partial r^2}\mathbf{Y}^e\\
\dfrac{\partial^2 \mathbf{M}^T}{\partial s^2}\mathbf{X}^e&\dfrac{\partial^2 \mathbf{M}^T}{\partial s^2}\mathbf{Y}^e\\
\dfrac{\partial^2 \mathbf{M}^T}{\partial r\partial s}\mathbf{X}^e&\dfrac{\partial^2 \mathbf{M}^T}{\partial r\partial s}\mathbf{Y}^e\end{bmatrix}
\begin{bmatrix}
\dfrac{\partial \mathbf{M}^T}{\partial r}\mathbf{X}^e&\dfrac{\partial \mathbf{M}^T}{\partial r}\mathbf{Y}^e\\
\dfrac{\partial \mathbf{M}^T}{\partial s}\mathbf{X}^e&\dfrac{\partial \mathbf{M}^T}{\partial s}\mathbf{Y}^e
\end{bmatrix}^{-1}
\begin{bmatrix}\dfrac{\partial\mathbf{I}^T}{\partial r}\\\dfrac{\partial\mathbf{I}^T}{\partial s}\end{bmatrix}
\right)
$$
the Laplacian of the field variable could be calculated from the above formula in each element.
update
for example, for the four-node quadrilateral element with linear interpolation shape functions
$$
\mathbf{M}=\mathbf{I}=
\begin{bmatrix}
(1-r)(1-s)/4&(1+r)(1-s)/4&(1+r)(1+s)/4&(1-r)(1+s)/4
\end{bmatrix}^T\equiv\mathbf{N}
$$
and coordinates
$$
\mathbf{X}^e=\begin{bmatrix}1&4&2.5&1.2\end{bmatrix}^T
$$
$$
\mathbf{Y}^e=\begin{bmatrix}2&1&4&3\end{bmatrix}^T
$$
the second derivative matrix would be
$$
\begin{bmatrix}\dfrac{\partial^2}{\partial x^2}\\
\dfrac{\partial^2}{\partial y^2}\\
\dfrac{\partial^2}{\partial x\partial y}\end{bmatrix}
\mathbf{N}^T
=
\begin{bmatrix}\left(\dfrac{17}{40}s-\dfrac{43}{40}\right)^2&
\dfrac{1}{4}s^2&
-\dfrac{17}{40}s^2+\dfrac{43}{40}s\\
\left(\dfrac{17}{40}r+\dfrac{13}{40}\right)^2&
\left(\dfrac{1}{2}r+1\right)^2&
-\left(\dfrac{1}{2}r+1\right)\left(\dfrac{17}{20}r+\dfrac{13}{20}\right)\\
\left(\dfrac{17}{40}r+\dfrac{13}{40}\right)\left(\dfrac{17}{40}s-\dfrac{43}{40}\right)&
\dfrac{1}{2}s\left(\dfrac{1}{2}r+1\right)&
-\dfrac{1}{2}s\left(\dfrac{17}{40}r+\dfrac{13}{40}\right)+\left(\dfrac{1}{2}r+1\right)\left(\dfrac{17}{40}s-\dfrac{43}{40}\right)
\end{bmatrix}^{-1}
\left(
\begin{bmatrix}0&0&0&0\\0&0&0&0\\\dfrac{1}{4}&\dfrac{-1}{4}&\dfrac{1}{4}&\dfrac{-1}{4}\end{bmatrix}
-
\begin{bmatrix}0&0\\0&0\\-\dfrac{17}{40}&\dfrac{1}{2}\end{bmatrix}
\begin{bmatrix}
\dfrac{43}{40}-\dfrac{17}{40}s&\dfrac{1}{2}s\\
-\dfrac{17}{40}r-\dfrac{13}{40}&\dfrac{1}{2}r+1
\end{bmatrix}^{-1}
\begin{bmatrix}
\dfrac{1}{4}s-\dfrac{1}{4}&\dfrac{1}{4}-\dfrac{1}{4}s&\dfrac{1}{4}s+\dfrac{1}{4}&-\dfrac{1}{4}s-\dfrac{1}{4}\\
\dfrac{1}{4}r-\dfrac{1}{4}&-\dfrac{1}{4}r-\dfrac{1}{4}&\dfrac{1}{4}r+\dfrac{1}{4}&\dfrac{1}{4}-\dfrac{1}{4}r
\end{bmatrix}
\right)
$$