Questions tagged [c++]

A powerful object oriented programming language.

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302 views

Newton - Raphson method : maxima of function in 2 variables

I am computing the maximum of a function (with two-variables) using Newton-Raphson method. The function is : $e^{-(x \ - x_0)^2 - (y \ - y_0)^2}$, whose maxima exists at $(x_0,y_0)$. The Jacobian ...
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97 views

MPI_Finalize() only some processors

I want to develop a distributed algorithm with MPI which have load balancing capability. But there is a situation that I'm not very clear about, which is, when the number of tasks is less than the ...
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114 views

lightweight implementation of semiempirical quantum chemistry (e.g. MNDO,AM-1,PM3)

I'm searching for semi-empirical quantum chemistry solver which would be easy to integrate into my own software. I found a few implementations which can be in principle used e.g. MOPAC, ORCA, SQM some ...
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87 views

Problem in analyzing the program of Gauss Jordan Inverse problem

I had to code a program which calculates Inverse of a matrix by Gauss-Jordan Inverse method , I was trying to analyse the program and then code it myself. the link http://hullooo.blogspot.in/2011/...
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65 views

Is MATLAB feasible for app deployment versus lower level languages [duplicate]

MATLAB/Octave is a pretty useful language for prototyping scientific computation use cases, however I would like to know if the sheer nature of being a high level language bottlenecks how fast the ...
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418 views

Looking for C++ function for performing optimization of parameters for multivariable function

I am adapting a Java program from C++ and need a C++ function to perform the same task as the Java BOBYQAOptimizer() function. Can anyone recommend a C/C++ library with equivalent or similar functions ...
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0answers
108 views

C++ Library: What is the Most Efficient Library that Factorizes a Polynomial?

I need to know what library is the fastest one that can factorize a polynomial of large degree whose coefficients are big integers. I have tried NTL library to factorize a monic polynomial but it is ...
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90 views

Elemental vs DPLASMA

I want to use one of these two libraries into my C++ project to basically invert a dense matrix (with Cholesky). Of course, I am interested in a distributed environment. Both libraries seem nice so ...
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402 views

Get a single value from a global Vec in petsc [closed]

I don't understand the concept with local and global vec's in petsc when it come to DMDAVecGetArray and VecGetValues. I'm creating some DMDA Vec in parallel which works well. Now I want to access ...
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635 views

Can you provide me with the source code of DMRG writen by C++?

I want to study the Density matrix renormalization Group(DMRG). Can some one provide me with the souce code which is writen by C++ for study purpose only? The code is not necessiary very professional, ...
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347 views

Practical implementation of spatial binning for rectangular range queries

I have a bunch of polygons and a coarse uniform grid. I want to implement two different range queries, for a rectangle aligned with the uniform grid: Does the rectangle intersect with any polygon at ...
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0answers
246 views

Memory allocation error with GSL ODE solver applied to system of 4 ODEs

I am trying to solve a (large) system of ODEs with GSL solvers. When I use driver method I get an error message of could not allocate space for gsl_interp_accel, ...
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2answers
268 views

Matlab, Mathematica & LAPACK returning 3 different eigenvectors

(I'm not sure which of math.se / stackoverflow / scicomp.se is the right place to ask this question) I have a C++ code which generates a complex matrix and then calculates its eigenvalues and ...
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1answer
345 views

I've developed a derivative-free optimization method, looking for comments

Here is the URL: https://github.com/avaneev/biteopt I've tested it on numerous global optimization benchmarking functions (included), and on real-world hyperparameter optimization problems I have. ...
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1answer
2k views

Inversion of a matrix using c++ library armadillo or eigen [closed]

I'm trying to find inverse of a matrix using c++ library armadillo or eigen. But first row of the matrix is wrong, please note that other elements are correct. I'm unable to understand what mistake I ...
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1answer
177 views

GMRES: Making the matrix square without solving for boundaries

How do we define the matrix for GMRES, if we do not want to solve the boundary elements but only the interior ones. I am using pentagonal elements so in a row there are 6 elements (cell itself + 5 ...
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2answers
774 views

Does armadillo library slow down the execution of matrix operations?

I've converted a MATLAB code to C++ to speed it up, using the Armadillo library to handle matrix operations in C++, but surprisingly it is 10 times slower than the MATLAB code! So I test the ...
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1answer
1k views

Order of eigenvalue problem using c++ Eigen library

I have the following 6x6 matrix (taken from Google Books p. 129): For background info: All the entries depend on the momentum $k$. Getting the eigenvalues of this matrix for each $k$ corresponds to ...
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1answer
589 views

Speeding up ODEINT stiff example [closed]

I am trying the implement the following odeint solver example but my differential equations are different. https://github.com/headmyshoulder/odeint-v2/blob/master/examples/stiff_system.cpp The ...
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1answer
82 views

Questions about implementing an electromagnetism/photonics solver package

I am hoping to start (very slowly) on implementing some form of a computational photonics/electromagnetism package. I know things like Meep, S4, FDTD++, EMPy, and a host of other proprietary/free/...
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1answer
2k views

Equation of motion by RK4 method

I would like to sole the spring mass equation of the form: $M\ddot{Y}+B\dot{Y}+KY = F_y(t)$, where $M :$ mass, $B :$ Damping, $K : $ stiffness, $F_y :$ external force and $Y :$ displacement in ...
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1answer
91 views

$LU$ factorization routine to solve system $Lv = f$ and $Uv = f$

I implemented an $LU$ factorization algorithm on c++ for a $n$ by $n$ matrix $A$, and I wanted to now write a routine that solves the systems $Lv = f$ and $Uv = f$. How would you recommend writing ...
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1answer
397 views

How can I use Scipy to fit data generated from a C++ model?

I currently have a functioning and blazing fast model written in C++ and CUDA. However, I'd like to use Scipy.minimize to fit the model to some experimental data. I was hoping it would be easy, but ...
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1answer
51 views

Cells segregation

There is unstructured grid which contains only quadrangles cells. Each cell has 4 neighbors, and known them (has a pointer to them). I can iterate through all cells in the grid. Some cells are marked ...
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2answers
139 views

Spherical volume integral from pre-calculated points - which algorithm is best?

I need a fast and accurate method to calculate 3d spherical volume integrals. I have pre-calculated data of high precision that just needs a few trivial manipulations before each integration step - ...
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1answer
400 views

Three body problem in C++

I am in a begginers programming course and we got a little project. I chose to simulate the three body problem using the Euler method. Even though the system is chaotic there are some special cases ...
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1answer
69 views

Unexpected behavior, values tend to converge instead of fluctuate. (MD)

I am writing a molecular dynamics program to create an lattice and populate it with atoms/molecules. These then are given random velocities and the system is initialized. Then throughout time the ...
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2answers
1k views

Simulating a traveling sine wave

I'm trying to make an animation of a travelling sine wave (amplitude vs. position) would anyon here happen to know how to do so?
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2answers
108 views

How to determine the number of c points in algebraic multi grid

I am trying to write an algebraic multi-grid solver (in c++). At a given level I determine which nodes are c-points and which nodes are f-points (where the total number of c and f points equals the ...
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2answers
2k views

Symmetric Matrix Computation (Eigen & C++)

I want to compute a symmetric matrix A from a vector b by: A = b * b'. Does the Eigen library automatically take into account that it does not need to do all calculations to get A (because of the ...
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1answer
56 views

Computing excited states using itensor (with DMRG)

I am trying to compute first few excited states of some Hamiltonian (I am using itensor and its DMRG algorithm). To do so, I am ...
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1answer
87 views

Good C, C++ library for efficient grid search / tuples, ideally with bindings to Eigen

I have a $q$-dimensional grid, known at run, not compile-time, that has $50$ points in each direction and hence $50^3$ combinations that I would like to first build and then call a function with each ...
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1answer
158 views

Looking for a converter of AMPL/GAMS models into C code

I've done an extensive web search, but could not find an option. Conversion between model formats is available, but conversion of objective function and constraint equations into C code seems absent. ...
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1answer
61 views

Wanting an explanation of the variables in Iterative PCA algorithm

I've been trying to implement the CPU GS-PCA algorithm in this paper . The code starts on page 28 I have a program written a script in python which gives the same output as the C++ program in the ...
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1answer
145 views

How to do a Generalized Complex Schur (or QZ) Decomposition with Eigen C++? [closed]

I would like to do a Generalized Schur (or QZ) decomposition for a pair of complex matrices $A$ and $B$. I found the following class: ...
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1answer
99 views

Is the time step size of a Rosenbrock method for stiff systems iteratively calculated?

I have an ODE system of the general form y' = k(y)(x) + q(z)(x) x' = a(z)(x) + b(x)(x) where k,q,a and b are also dependent on the states x and y. The ...
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1answer
49 views

Passing in a vector from this particular matrix class floating around online [closed]

I am using this matrix class here to assist me in converting this Least Squares algorithm that prices American options that is written in Matlab in C++. My question is pretty simple. I want to pass in ...
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1answer
849 views

two level iterators C++ [closed]

I am trying to implement a two level iterator as I will now describe. Basically I have a "vector of vectors" and I want a single iterator that will loop over all the objects in the vector of vectors. ...
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2answers
137 views

Adaptive numerical integration of a univariate vector integrand

Background & Problem formulation I'm trying to write a simple program in C++ that performs adaptive numerical integration of vector valued integrands (in one variable), i.e. $$\int_a^b \bar{f}(...
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1answer
721 views

Fastest way to diagonalize square matrices with c++

I am currently writing software in c++ which solves the eigenvalue problem of sparse hermitian matrices. The size of the matrix depends on the user input, but as an estimation it will roughly be ...
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1answer
320 views

Debugging in parallel mode using Netbeans

I want to debug a c++ code with Netbeans. I can use the debugger in sequential mode but I dont know how to debug it when I want to run it in parallel. I would be grateful if anyone help me on this ...
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1answer
420 views

Fastest linear solver for sparse positive semidefinite, striclty diagonally dominant matrix

What is the state of the art for fastest linear solver for sparse, positive semi definite and strictly diagonally dominant matrix with N varies from ~700 to ~3000, and about a 1/16 of the matrix is ...
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2answers
3k views

Most efficient library to diagonalize exactly large hermitian or unitary matrices

I am working on a physics problem which requires obtaining the exact eigenvalues and eigenvectors of Hermitian and Unitary matrices numerically. Naturally I would like to ask the experts what are the ...
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1answer
7k views

Vertical and horizontal segments intersection (Line Sweep)

Introduction: I have a vertical segment S That i want to move across a plane (Left --> Right), and find intersections with horizontal lines. Problem : The problem which i am having is the following:...
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68 views

How to read data from simply formatted text file (c++)?

Mesh information like points, faces and cells is to be stored into separate files: e.g. for points file: # points data: x y z N_Points 100 x1 y1 z1 x2 y2 z2 ... cell file: # cells data: ...
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292 views

OpenCV: How to get the “rectified” fundamental matrix?

I have a stereo image pair and the respective intrinsics and extrinsics of both cameras. With this information, I can calculate the fundamental Matrix between the two cameras (let's call it F). I can ...
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1answer
28 views

combinatory exploration c++ [closed]

I have n spots with 2 possible positions each. I would like to explore all of this possibilities in C++ using loops (or something else if there is a better option). I was thinking of looping from 0 ...
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1answer
140 views

How to give a simple estimation of errors for results obtained from 4th order Runge-Kutta

This question is a follow up of another one I have asked a while ago. I have successfully implemented my problem using odeint library and I get the results I expect. However I would like to give an ...
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1answer
992 views

Domain Decomposition with PETSc

Does anyone have any experience on Domain Decomposition using PETSc library? I have used PETSc for creating my vectors and matrix within my C++ code. I also used KSP to solve the linear system. I ...
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0answers
165 views

Permissive Math Library for Parameter Statistics in C++

I am looking for recommendations for a C++ math library, with a permissive licence, well suited to calculating a wide variety of statistics on segmentations of timebased parameter data. I would be ...