Questions tagged [diffusion]

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3
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0answers
98 views

How to account for the interface between two different phases in a discretized diffusion model?

I have tried to set up a model for the diffusion of a gas into a liquid. The two media are next to each other and the geometry is spherical because the system should simulate the diffusion out of a ...
2
votes
0answers
71 views

Numerical solution to N-dimensional diffusion on simplex?

Assume I have a system of at least (but generally only) $N+1$ points in an $N$-dimensional space ($N > 3$ is possible). At each of these points $x_i, i=1,...,N+1$ I know an initial potential/...
2
votes
0answers
57 views

Harmonic average of Diffusion Tensors in Finite Volume Method

I want to implement a Bilinear Finite Volume discretisation of the anisotropic diffusion problem: $$\frac{du}{dt} = \nabla \cdot (\textbf{D} \nabla u)$$ Both my degrees of freedom as well as the ...
2
votes
0answers
162 views

Spurious oscillations in diffusion-reaction problems with finite volume

I have successfully solved the multi-species diffusion-reaction equation \begin{equation} \frac{\partial c_i}{\partial t} = \nabla \cdot (d_i(x)\nabla c_i) + s_i(x,t), \quad \quad (1) \end{equation} ...
2
votes
0answers
216 views

1 D Diffusion equation FDM with different layers

I'm trying to solve this particular equation $\frac{\partial u}{\partial t} = \frac{\partial}{\partial x} \big[D_{i}(x)\frac{\partial u}{\partial x} \big] + S(x,t)$ where the $i$ index denotes ...
1
vote
0answers
38 views

Limit to volume change in a discretized mathematical model?

I have set up a mathematical model describing the diffusion of ozone out of a gas bubble. The bubble is surrounded by a thin gas film. So actually, the model describes the diffusion of ozone through ...
1
vote
0answers
134 views

Neumann boundary condition FD implementation for instationnary diffusion equation

I am trying to solve this diffusion equation : $\dfrac{\partial D\dfrac{\partial f}{\partial x}}{\partial x}+S = \dfrac{\partial f}{\partial t}$ ($D$ is not constant and varies according to $x$) with ...
1
vote
0answers
45 views

How is the Gastner-Newman equation implemented to create value-by-area cartograms?

There is a paper called "Density-equalizing map projections: Diffusion-based algorithm and applications" by Michael T. Gastner and M. E. J. Newman, which explains their algorithm (which is based in ...
1
vote
0answers
57 views

elliptic equation with exponential coefficient

I'm trying to solve the following equation $$\dfrac{\partial}{\partial x}\left(e^{au}\dfrac{\partial u}{\partial x}\right) = 0$$ Of course, this equation can be solved analytically. I am trying to ...
1
vote
0answers
182 views

Reaction-diffusion equations

I'm simulating a biological phenomena with reaction diffusion equations. There are multiple diffusing materials and there are some complex relations about consumption and production of such materials. ...
1
vote
0answers
126 views

Discontinuity at Interface

The equation at the left of the interface is \begin{equation} \displaystyle\frac{\partial C_i}{\partial t} = D_i \nabla^2 C_i - z_i \frac{D_i}{RT}F \nabla \cdot (C_i \nabla \phi_2) \end{equation} ...
1
vote
0answers
107 views

Reducing oscillations a 3D Alternating direction explicit scheme for the diffusion equation?

Hi I have made a 3D alternating direction explicit scheme for solving the diffusion equation, which will eventually replace a FTCS scheme in model of bubble dynamics in tissue. I have been testing it ...
0
votes
0answers
275 views

3D Diffusion Equation in Fourier space

I'm solving the 3D Diffusion equation $$u_t=k(u_{xx}+u_{yy}+u_{zz})$$ in MATLAB using Fourier techniques. I assume a 3D Fourier expansion $(e^{-ipx},e^{-imy},e^{-imz})$of the solution. Physical ...
0
votes
0answers
198 views

advection diffusion equation

Would you know what is the condition for stability for the advection-diffusion equation where we treat the diffusion part using Crank-Nicholson and the advection part using FCTS (forward in time ...