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Questions tagged [laplacian]

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2D cavity flow: Adding zero Dirichlet condition to the top boundary leads to NAN

I am following this guide to create a simple cfd solver for incompressible 2D fluid in a square cavity. The following Matlab code sample from the guide creates a Laplacian (coefficient) matrix with ...
Lit_try's user avatar
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2 votes
1 answer
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Computing the Fiedler vector of a large, sparse graph

I have a sparse, undirected and unweighted graph $G$ of size $n$, with $n$ on the order of say several million. I would like to compute the Fiedler vector $f$ of $G$, which is the eigenvector ...
Set's user avatar
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1 vote
1 answer
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Reference request: graph Laplacian approximation for domains/manifolds

Is there any reference on solving the heat equation on irregular geometries via creating a mesh and using the graph Laplacian instead of FEM techniques? (Convergence to real solution). That is to say, ...
Aner's user avatar
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3 votes
0 answers
138 views

Fast Fourier Transform on Meshes

I have a (closed, manifold, oriented) triangular mesh for which I build a matrix $L\in\mathbb{R}^{n\times n}$ discretising the negated Laplace-Beltrami operator. The matrix $L$ is symmetric positive ...
lightxbulb's user avatar
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1 answer
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Solving the wave equation for a circular membrane in polar cordinates

As you see this mode is not right, unless for what i understand And the initial conditions were ...
Manuel Borra's user avatar
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0 answers
38 views

Constructing generalized Laplacian matrix?

I am staring intently at this paper by Botsch and Kobbelt. In particular, I want to make the matrix specified in equation 5. I am trying to understand the specific computations I must instruct a ...
Makogan's user avatar
  • 345
1 vote
1 answer
329 views

Discrete Laplacian operator with finite element discretization

Let a function $u \in H^1_0(\Omega)$ defined by its values at the mesh nodes. Can we compute its Laplacian using the matrix resulting from the finite elements discretization of Laplace's equation? I ...
gbmreda's user avatar
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1 vote
0 answers
132 views

Discrete laplacian 9 point

I am trying to write a code for 9 point discrete laplacian. I would like to write a matrix and solve the linear system $AU=F$ with gradient conjugate method. I wrote the matrix this way ...
Cristie's user avatar
  • 41
1 vote
1 answer
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Applying spectral method to a damped, driven 2D bending-mode wave equation on an irregular domain with heterogeneous boundary conditions

I'm trying to model some two-dimensional waves, and am unsure how to combine my boundary conditions with spectral methods. The PDE I'd like to explore resembles the equations for damped, driven ...
MRule's user avatar
  • 153
4 votes
1 answer
261 views

ON the Kronecker product form of the laplacian matrix

It's well known that if we use 2nd order, centered, finite differences for the Laplace operator, we have that the matrix can be written as $$K=I \otimes A + A \otimes I $$ where $I$ is the identity ...
FEGirl's user avatar
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5 votes
1 answer
326 views

Does DCT diagonalize the FD discretisation of the Laplacian with Neumann boundary conditions?

If one has the Poisson problem (assume $\int_{\Omega} f = 0$ and $\int_{\Omega} u = 0$): \begin{alignat}{3} \Delta u(x) &= f(x), &\quad&x\in\Omega \\ \partial_nu(x) &= 0, &\quad&...
lightxbulb's user avatar
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4 votes
2 answers
169 views

Numerical estimation of eigenfunctions of Laplacian

Consider the Laplace equation, $$ \nabla^2 f(r,\theta,\phi) = 0 $$ in spherical coordinates. We know that the solution to this equation can be derived analytically, and is given by, $$ f(r,\theta,\phi)...
vibe's user avatar
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2 votes
0 answers
253 views

Numerical instability in the inverse Laplace transform

I have a problem with Laplace inversion and my function is not numerically stable for the Laplace inverse, but I do not understand the cause of this problem. Here is my code and graph of this problem. ...
Ali AlCapone's user avatar
0 votes
2 answers
127 views

Eigenvectors of Laplacian

I am studying introduction to Multigrid methods. In all tutorials, authors write that eigenvectors of Laplacian (1D, finite difference) are given as $w_k(x_i) = \sin(k \pi x_i),$ where $x_i$ is a ...
student1's user avatar
1 vote
3 answers
210 views

preconditioner for Laplace "without" boundary values

I'm looking at solving systems with the FEM discretization $$ -\int_\Omega (\Delta u) v = \int_\Omega \nabla u \cdot \nabla v - \int_\Gamma (n\cdot\nabla u) v. $$ without applying Dirichlet- or ...
Nico Schlömer's user avatar
4 votes
1 answer
3k views

3D laplacian operator

I have been unable to find the equivalent of the 5-point stencil finite differences for the Laplacian operator. In 2 dimensions for me it is clear that, using the finite difference method: $$ \nabla_{...
Nankin's user avatar
  • 43
3 votes
1 answer
221 views

How avoid square shape with Laplacian operator in reaction diffusion calculations?

I have used different variants of the Laplacian operator (div grad) using 4, 8, 12, 20 and 24 of the closest points. I get problems due to the chosen coordinate system and the discretization of the ...
David Jonsson's user avatar
9 votes
2 answers
2k views

What happens when I use a conjugate gradient solver with a symmetric positive semi-definite matrix?

I have a symmetric positive semi-definite matrix, i.e., a laplacian and wonder what may happen when I use a CG solver, that is an algorithm for positive definite matrices. What happens when the ...
allo's user avatar
  • 617
4 votes
2 answers
2k views

Kronecker product representation of the finite difference laplacian

The laplacian equation when discretized gives a system of linear equations that can then be solved. See the answer to this question: https://math.stackexchange.com/questions/3120948/discretization-...
Babaji's user avatar
  • 195
2 votes
0 answers
79 views

How to account for a corner node with zero-flux condition at an extrapolated distance

I am trying to implement a numerical solver and am having troubles dealing with boundary conditions, especially in the corners. I have a 2D mesh, and on the left I have a Dirichlet condition, on the ...
William Abma's user avatar
1 vote
0 answers
510 views

High-accuracy numerical differentiation

I have a $200 \times 200$ matrix representing the values taken by a function over an equally spaced grid. I would like to perform derivatives on it. I am interested in its gradient (i.e. its ...
AndreaPaco's user avatar
5 votes
2 answers
367 views

Factorize laplacian in terms of first derivative matrix

I am trying to factorize the following Laplacian matrix in terms of $ D^TD$, D is the first derivative matrix. The tridiagonal form of the secon derivative matrix using Neumann boundary condition is ...
Natasha's user avatar
  • 433
1 vote
2 answers
94 views

Access optimized data structure for representing integer lattice

Consider the integer lattice in $2d$, namely the set $\mathbb{Z}^2 = \{(x,y): x,y\in \mathbb{Z}\}$, and let $u:\mathbb{Z}^2 \to \mathbb{R} $ be a function defined on some bounded subset of $\mathbb{Z}^...
Hayk's user avatar
  • 111
2 votes
0 answers
73 views

Simultaneous update to barycenters

Suppose a tiling is given in 2D (an embedding of a planar triangulated graph), with all faces convex. Now suppose one moves each point, one by one, to the barycenter of its neighbors. I think that ...
kevin811's user avatar
1 vote
0 answers
55 views

What is the finite-difference representation of the Laplacian operator with periodic boundary conditions? [duplicate]

I am using a central-difference scheme to solve the eigenvalue problem $$\frac{d^2}{dx^2}u = \lambda u$$ on a unit interval with periodic boundary conditions. My understanding is the eigenvectors $...
DJames's user avatar
  • 417
8 votes
1 answer
1k views

Correct eigenfunctions of Laplace operator by Finite Differences

I am trying to compute the eigenfunctions of the Laplace operator, i.e. finding $u$ in $$ -\nabla^2 u = \lambda u .$$ For now I am trying to do this in 1D, so $$ \nabla^2 = \partial_{xx} .$$ I am ...
islanss's user avatar
  • 147
3 votes
2 answers
1k views

Solving Ax = b with sparse A and sparse b

Let's suppose I'm numerically solving the Poisson equation for a delta function source: $$ \nabla^2 f(x) = \delta(x-x') $$ I can represent the Laplacian $\nabla^2$ using the finite difference method ...
alexvas's user avatar
  • 203
1 vote
1 answer
94 views

How to discretize Laplacian near refinement boundary

Given a block structured grid with a refinement factor of two, what are some of the common ways to discretize a Laplacian near a refinement boundary? See also the picture below, in which $u_H$ and $...
Jannis Teunissen's user avatar