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4
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116 views

The numerical solution of a (very ugly) set of integro-diferential equations

I've been having fun playing around with a simple model for reaction in a co-flow fluidized bed (I'm afraid I'm a chemical engineer, not a computer scientist). Unfortunately, simple physical ...
4
votes
0answers
106 views

ADMM for Linear Program over graph

I want to use ADMM to solve a LP defined over a graph. According to Distributed optimization and statistical learning via the alternating direction method of multipliers S. Boyd, N. Parikh, E. ...
4
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0answers
163 views

Poisson equation in frequency domain

I need some help in numerically solving the nonlinear Poisson's equation for electrons in frequency domain. The steady-state equation is: \begin{equation} \nabla.(\epsilon\nabla\varphi) = q\left(n_i\...
4
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0answers
400 views

Numerically calculating the divergence of a set of oriented points

Say I have a set of oriented points at locations $\vec{v_i}$ with each some direction $\vec{n_i}$, in practice they represent the normals of some surface that has been non uniformly sampled. How would ...
4
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0answers
86 views

Can I make this numerical integration continuously differentiable?

Suppose I have the discrete values $f(x_i)$ for every discrete value $x_i$ greater than some $\varepsilon$, and I want to numerically calculate the following integral: \begin{equation} n = \int_\...
4
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0answers
149 views

Eigenvalue-style optimization with quadratic constraints

Suppose $A\in\mathbb{R}^{n\times n}$ is symmetric and positive definite and that we have several symmetric matrices $B_i\in\mathbb{R}^{n\times n}$ that are low-rank and indefinite. I need an ...
4
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0answers
238 views

Boundary conditions in the Finite Element Method at only one side of computational domain

I want to solve a Sturm-Liouville problem in 1D, i.e., \begin{align} [p(x)\ u'(x)]'+q(x)u(x) = f(x) \end{align} with boundary conditions \begin{align} u(0)=a \hspace{1cm} u'(0)=b \end{align} How do I ...
4
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0answers
251 views

What are the career options for computational scientists other than being in software Industry?

I would like to know the career options for a computational scientist other than getting into software industry. I wish to use the my skills of Numerical Linear Algebra,Parallel Programming, ...
4
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0answers
119 views

What causes periodic humps in residual plots?

When using many iterative methods, whether for solving linear systems, looking for steady-state convergence in CFD, etc., the semilog plot of the residual often shows "humps" as the residual decays. ...
4
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0answers
70 views

Is there a term for Goodhart's Law in the context of optimization?

Let's say I'm optimizing something. To pick an arbitrary example, let's say I'm choosing the shape of some part to maximize strength-to-weight ratio. So I get some FEM software, parametrize the shape, ...
4
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0answers
79 views

Graph optimization for parallel processing

Consider the following example structure of overlapping images marked A,B,C,D. The possible overlaps are marked by gray color: The structure can be represented by a weighted undirected graph (images ...
4
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0answers
110 views

Computing entries of a matrix in parallel using GPU

I am trying to solve $Ax=b$ a system of linear equation. The matrix $A=(a_{ij})$ is constructed as $$a_{ij}=\int_0^1\int_0^1 K(x,y)h_i(x)h_j(y) dxdy.$$ The evaluation of integral takes a lot of time, ...
4
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0answers
449 views

Large meshing with tetgen

So I have a point cloud that I am creating a 3D flat rectangular surface from. I'm then turning it into a hollow box and connecting the corners by just dropping this surface mesh down. I need it to ...
4
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0answers
645 views

Neural network performs worse when using more input variables

This question is based more on the theory of neural networks than my particular implementation. Therefore I will leave out my code unless requested. I'm working on a project in C# which can create ...
4
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0answers
842 views

2D wave equation with Mur boundary condition - setting up the RHS and solving (time-steps)

I am trying to solve a 2D wave equation implicitly using FD with central approximations with the following boundary conditions $$\begin{align} &u=2\sin\left(\frac{2\pi}{5}t\right)\quad \text{at }...
4
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0answers
145 views

numerical analysis of a partial integro-differential equation

I have to numerically solve a nonlinear partial integro-differential equation. This is my equation, $$\frac{\partial y(x,t)}{\partial t}=\int_{-1/2}^{1/2} \frac{\pi\cos u}{\sin\pi u-\sin\pi x} \frac{\...
4
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0answers
198 views

Alternative to (costly) matrix multiplication

Consider the integral $$2\pi T = -\frac{1}{2} \int_0^{2\pi} A\frac{\partial B}{\partial \xi} \ d\xi$$ where $$A= \sum_{-N}^N i \ sign(n) \ B_n e^{-in\xi}; \quad \quad B= \sum_{-N}^N \ B_n e^{-in\xi}...
4
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0answers
75 views

Large residual when integrating 2nd order ode close to singularity with SciPy ode / ODEPACK

I am trying to integrate a 2nd order ODE with a singularity at close to the initial condition. Why do I get large residuals when I plug-in the result of my integration back into the ODE? The equation ...
4
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0answers
238 views

Is it possible to predict the null space of a structure from contributing elements null spaces?

I am trying to solve an almost incompressible problem with heterogeneous properties by domain decomposition. Solution with CG converges slowly or divergerces completely. My problem becomes ill-...
4
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0answers
142 views

How big a matrix can we row reduce in reasonable time?

I have very large matrices that I would like to row reduce (I need to keep track of the steps and find a basis of the kernel/image, not just find the rank). The good news is that I work mod 2 and the ...
4
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0answers
301 views

Frozen coefficient method (von Neumann stability analysis)

Earlier it was considered that frozen coefficients method for Neumann stability analysis for finite difference scheme is more heuristic than rigorous. But I have read some information in a book by ...
4
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0answers
991 views

Poisson equation with pure Neumann boundary conditions (using FEM)

I am trying to derive the correct variational form for the Poisson equation with pure Neumann boundary conditions, and an additional contraint $\int_{\Omega} u \, {\rm d} x = 0$, as described in this ...
4
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0answers
1k views

Python - calculation time derivative and laplacien by finite differences

I would like to determine a temporal derivative and a Laplacian by the finite differences method to solve the heat equation in a 1-dimensional case. My aim is to get the sources term that is why I ...
4
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0answers
98 views

Tracking for two meshes

I'm dealing with physical simulation (position based dynamic). Now I'm trying to realize tracking for two meshes. In order to explain what does it mean, let's assume that we have two similar meshes: ...
4
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0answers
134 views

Methods for integrating black box functions on a non-uniform grid

If i have some function expressed as points on a non-uniform grid (I'm specifically interested in logarithmic grids, but general results are also interesting), and I want to integrate it, I believe ...
4
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0answers
426 views

Finite volume method

I have question connected with finite volume method. Consider equation $$\frac{\partial u}{\partial t}=\operatorname{div}A\nabla u +f . \quad x\in \overline{B}_{1} (0)\subset \mathbb{R}^3 -\text{unit ...
4
votes
1answer
247 views

Quadrature and quadrature-free discontinuous galerkin method for non-linear PDE

Quadrature-free DG method using nodal Lagrangian basis are computationally very efficient. I have seen many papers using this method for linear PDE but almost no literature for non-linear PDE like ...
4
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0answers
85 views

How do I perform chebyshev interpolation from a to b with custom angle range?

Typically Chebyshev interpolation from $-1$ to $1$ with angle from $0$ to $\pi$: $\xi_j=\cos \left ({\pi j \over N}\right )$ $x_j=(1+\xi_j) * {L \over 2}$ $w$: $w_0=\pi/(2N)$ $w_{1,...,N-1}=\pi/(N)$...
4
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0answers
82 views

Computing linear combinations of sines and cosines (phasors)

I have a finite series that looks like this: $f(t) = \sum^n_{i=0} A_i cos(\Theta_i + \omega_i t) + B_i sin(\Theta_i + \omega_i t)$ That is, a finite series of pairs of phasors. What's the state of ...
4
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0answers
229 views

Sound Waves Simulation in 3D Environment

I want to do a simulation of sound waves including wave propagation, absorption, and reflection in 3D space. I did some research and I found this question in stackoverflow but it talks about ...
4
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0answers
577 views

Finding roots of systems of equations with a Jacobian that is singular everywhere

Given $a\in\mathbb{R}^{mn\times n}$, find a $C\in\mathbb{R}^{n}$, $x\in\mathbb{R}^{m\times n}$ such that $$ 0 = f_{k}(\boldsymbol{C}, \boldsymbol{x}):=\sum_{i=1}^{m} C_{i} \left(\prod_{j=1}^{n} a_{kj}^...
4
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0answers
223 views

Negative viscosity stabilized by fourth order terms

I am trying to solve a "Navier-Stokes"-type problem where the viscosity is negative. Of course this renders the equation unstable and thus I add a fourth order term, so the entire equation becomes: $$...
4
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0answers
112 views

What are the governing equations solved in coupled atmosphere-ocean models?

In (hydrostatic) atmospheric general circulation models, for example the so-calle Primitive Equations, consisting of the horizontal momentum equation, the hydrostatic balance, the continuity equation, ...
4
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0answers
184 views

Time-stepping for coupled nonlinear PDEs

What are good references for time-stepping of the coupled incompressible Navier-Stokes-heat equation (Boussinesq flow), $$ \begin{cases} \rho\left(\dot{\mathbf{u}} + \mathbf{u}\cdot\nabla \mathbf{u}\...
4
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0answers
321 views

Understanding the meaning of Computational Order of Convergence

I am a postgraduate student with interest in numerical methods for solving nonlinear systems of equations. I have read some papers that discussed about 'computational order of convergence' for some ...
4
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0answers
1k views

Using MINPACK for curve fitting: implementation?

I need to implement a non-linear fitting algorithm in Fortran and chose to use MINPACK's flavor of the Levenberg-Marquardt algorithm as a basis for the least-squares stuff. However, I seem to ...
4
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0answers
75 views

Order of convergence of Scrodinger eq. with CN scheme

I'm trying to solve numerically the 1-dim time dependent Schrodinger equation using the Crank Nicolson scheme and the Thomas algorithm to solve the tridiagonal matrix. The physical system consists of ...
4
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0answers
670 views

Generating pseudo-random orthonormal bases for random projection

I am performing series of random projections i.e. projecting the input matrix onto randomly generated orthonormal bases (of much lower dimensionality). The projection is just a matrix multiplication ...
4
votes
0answers
83 views

Non-convergance when calculating temperature/heat flows through a section of rock

I am attempting to calculate temperature of section of rock in the earth as a function of vertical position in the rock and time. Along with it I am calculating the heat flow through the rock as a ...
4
votes
0answers
498 views

Fenics: Result of Steady state dynamic linear elastic doesn't match with actual values

I solved the steady state dynamic linear elastic model in a solid. My equation is a function of frequency and the strong form is: $$\operatorname{div}(\operatorname{stress}(\vec x, w)) + w^2 \rho u( \...
4
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0answers
218 views

Adaptive mesh data structure for Fast Marching Method to overcome RAM limit

On an uniform mesh of positions in space $\ (x_i,y_j,z_k)$: $$\ x_i = x_0 + i\Delta x,\quad i=0,\ldots,n_x$$ $$\ y_j = y_0 + j\Delta y,\quad j=0,\ldots,n_y$$ $$\ z_k = z_0 + k\Delta z,\quad k=0,\...
4
votes
0answers
168 views

Solving diffusion PDE using finite differences

I need some hints on how to solve this diffusion equation ($\alpha, k_1,k_2$ and $k_3$ are constants): $$ {\partial P \over \partial y} + k_1 {\partial P \over \partial t} + \alpha P = {1 \over k_2} ...
4
votes
0answers
174 views

Find maximum distance between elements given constraints on some

I have a list of numbered elements 1 to N that fit into positions on a number line starting with 1. I also have constraints for these elements: The element 1 is in position 1, and element N must be ...
4
votes
0answers
104 views

Existing software/scripts for spiral graphs?

I am looking for existing software or scripts to generate spiral graphs from cyclical (time) data, as presented by Webber and Muller. The graphs shown in the paper look like a great means of ...
4
votes
0answers
607 views

Perron-Frobenius theorem on general real symmetric matrices

From the Perron-Frobenius theorem, it might be concluded that the spectral radius is the largest eigenvalue for positive matrices, ie, matrices with strictly positive entries. In other words, the ...
4
votes
0answers
99 views

Time-stable spectral decomposition algorithm

Consider an $n \times n$ real, time-dependent matrix $A(t)$ such that $A(t) = A(t)^{T} > 0$ and $A(t)$ is continuous on $[a,b]$. Then it is posible to specify a matrix $S(t) \in SO(n)$ such that $S(...
4
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0answers
387 views

Why is my lower convex hull extraction algorithm not working?

Recently, I wrote an algorithm to obtain a delaunay triangulation of a random point set in $I=[-10,10]$x$[-10,10] \subset R^2$ by projecting these points onto the 3 dimensional paraboloid $z=x^2+y^2$, ...
4
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0answers
134 views

Probabilistic algorithms for matrix approximation

Considering regular matrix approximation inequality || $A - QQ^TA $|| < e where we try to approximate matrix $A$ by a lower rank orthonormal matrix $Q$. I've read an article on probabilistic ...
4
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0answers
250 views

Convergence rate of Monte-Carlo variance estimate

What is the convergence rate for Monte-Carlo variance estimate for a random variable $X \in {L^q}(\Omega ,R),2 < q < 4$?
3
votes
1answer
43 views

Differences between Discrete Fourier Transform and Continuous Fourier Transform?

I am trying to visualize the time dependence of a free particle given an initial wave-function using Python and I just wanted to know if I could use the in built FFT implementation from NumPy to find ...

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